ModelicaMatIO.h 15 KB

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  1. /* ModelicaMatIO.h - MAT file I/O functions header
  2. Copyright (C) 2013-2016, Christopher C. Hulbert, Modelica Association, and ITI GmbH
  3. Copyright (C) 2005-2013, Christopher C. Hulbert
  4. All rights reserved.
  5. Redistribution and use in source and binary forms, with or without
  6. modification, are permitted provided that the following conditions are met:
  7. 1. Redistributions of source code must retain the above copyright notice,
  8. this list of conditions and the following disclaimer.
  9. 2. Redistributions in binary form must reproduce the above copyright
  10. notice, this list of conditions and the following disclaimer in the
  11. documentation and/or other materials provided with the distribution.
  12. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
  13. ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
  14. WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
  15. DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
  16. FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
  17. DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
  18. SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
  19. CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
  20. OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
  21. OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
  22. */
  23. /*
  24. This file was created by concatenation of the following header files of the
  25. MAT file I/O library from <http://sourceforge.net/projects/matio/>:
  26. matio.h
  27. matio_pubconf.h
  28. */
  29. #ifndef MODELICAMATIO_H
  30. #define MODELICAMATIO_H
  31. #include <stdlib.h>
  32. #include <stdio.h>
  33. #ifndef MATIO_PUBCONF_H
  34. #define MATIO_PUBCONF_H 1
  35. /* Matio major version number */
  36. #define MATIO_MAJOR_VERSION 1
  37. /* Matio minor version number */
  38. #define MATIO_MINOR_VERSION 5
  39. /* Matio release level number */
  40. #define MATIO_RELEASE_LEVEL 6
  41. /* Matio version number */
  42. #define MATIO_VERSION 156
  43. /* Matio version string */
  44. #define MATIO_VERSION_STR "1.5.6"
  45. /* Default file format */
  46. #define MAT_FT_DEFAULT MAT_FT_MAT5
  47. /* Have MAT int64 / uint64 */
  48. #if defined(_WIN32)
  49. #if defined(_MSC_VER) || defined(__WATCOMC__) || defined(__MINGW32__) || defined(__CYGWIN__)
  50. #define HAVE_MATIO_INT64_T 1
  51. #define HAVE_MATIO_UINT64_T 1
  52. #else
  53. #undef HAVE_MATIO_INT64_T
  54. #undef HAVE_MATIO_UINT64_T
  55. #endif
  56. #else
  57. #define HAVE_MATIO_INT64_T 1
  58. #define HAVE_MATIO_UINT64_T 1
  59. #endif
  60. /* Have the <stdint.h> header file */
  61. #if defined(_WIN32)
  62. #if defined(_MSC_VER) && _MSC_VER >= 1600
  63. #define HAVE_MATIO_STDINT_H 1
  64. #elif defined(__WATCOMC__) || defined(__MINGW32__) || defined(__CYGWIN__)
  65. #define HAVE_MATIO_STDINT_H 1
  66. #else
  67. #undef HAVE_MATIO_STDINT_H
  68. #endif
  69. #elif defined(__GNUC__) && !defined(__VXWORKS__)
  70. #define HAVE_MATIO_STDINT_H 1
  71. #else
  72. #undef HAVE_MATIO_STDINT_H
  73. #endif
  74. /* Include integer type header */
  75. #if defined(HAVE_MATIO_STDINT_H)
  76. #include <stdint.h>
  77. typedef int16_t mat_int16_t;
  78. typedef int32_t mat_int32_t;
  79. typedef int64_t mat_int64_t;
  80. typedef int8_t mat_int8_t;
  81. typedef uint16_t mat_uint16_t;
  82. typedef uint32_t mat_uint32_t;
  83. typedef uint64_t mat_uint64_t;
  84. typedef uint8_t mat_uint8_t;
  85. #else
  86. #define mat_int16_t short
  87. #define mat_int32_t int
  88. #if defined(HAVE_MATIO_INT64_T)
  89. #if defined(_MSC_VER) && _MSC_VER < 1300
  90. #define mat_int64_t __int64
  91. #else
  92. #define mat_int64_t long long
  93. #endif
  94. #endif
  95. #define mat_int8_t signed char
  96. #define mat_uint16_t unsigned short
  97. #define mat_uint32_t unsigned
  98. #if defined(HAVE_MATIO_UINT64_T)
  99. #if defined(_MSC_VER) && _MSC_VER < 1300
  100. #define mat_uint64_t unsigned __int64
  101. #else
  102. #define mat_uint64_t unsigned long long
  103. #endif
  104. #endif
  105. #define mat_uint8_t unsigned char
  106. #endif
  107. #endif /* MATIO_PUBCONF_H */
  108. #include <stdarg.h>
  109. #if defined(__cplusplus)
  110. #define EXTERN extern "C"
  111. #else
  112. #define EXTERN
  113. #endif
  114. /** @defgroup MAT Matlab MAT File I/O Library */
  115. /** @defgroup mat_util MAT File I/O Utility Functions */
  116. /** @if mat_devman @defgroup mat_internal Internal Functions @endif */
  117. /** @brief MAT file access types
  118. *
  119. * @ingroup MAT
  120. * MAT file access types
  121. */
  122. enum mat_acc {
  123. MAT_ACC_RDONLY = 0, /**< @brief Read only file access */
  124. MAT_ACC_RDWR = 1 /**< @brief Read/Write file access */
  125. };
  126. /** @brief MAT file versions
  127. *
  128. * @ingroup MAT
  129. * MAT file versions
  130. */
  131. enum mat_ft {
  132. MAT_FT_MAT73 = 0x0200, /**< @brief Matlab version 7.3 file */
  133. MAT_FT_MAT5 = 0x0100, /**< @brief Matlab version 5 file */
  134. MAT_FT_MAT4 = 0x0010, /**< @brief Matlab version 4 file */
  135. MAT_FT_UNDEFINED = 0 /**< @brief Undefined version */
  136. };
  137. /** @brief Matlab data types
  138. *
  139. * @ingroup MAT
  140. * Matlab data types
  141. */
  142. enum matio_types {
  143. MAT_T_UNKNOWN = 0, /**< @brief UNKNOWN data type */
  144. MAT_T_INT8 = 1, /**< @brief 8-bit signed integer data type */
  145. MAT_T_UINT8 = 2, /**< @brief 8-bit unsigned integer data type */
  146. MAT_T_INT16 = 3, /**< @brief 16-bit signed integer data type */
  147. MAT_T_UINT16 = 4, /**< @brief 16-bit unsigned integer data type */
  148. MAT_T_INT32 = 5, /**< @brief 32-bit signed integer data type */
  149. MAT_T_UINT32 = 6, /**< @brief 32-bit unsigned integer data type */
  150. MAT_T_SINGLE = 7, /**< @brief IEEE 754 single precision data type */
  151. MAT_T_DOUBLE = 9, /**< @brief IEEE 754 double precision data type */
  152. MAT_T_INT64 = 12, /**< @brief 64-bit signed integer data type */
  153. MAT_T_UINT64 = 13, /**< @brief 64-bit unsigned integer data type */
  154. MAT_T_MATRIX = 14, /**< @brief matrix data type */
  155. MAT_T_COMPRESSED = 15, /**< @brief compressed data type */
  156. MAT_T_UTF8 = 16, /**< @brief 8-bit unicode text data type */
  157. MAT_T_UTF16 = 17, /**< @brief 16-bit unicode text data type */
  158. MAT_T_UTF32 = 18, /**< @brief 32-bit unicode text data type */
  159. MAT_T_STRING = 20, /**< @brief String data type */
  160. MAT_T_CELL = 21, /**< @brief Cell array data type */
  161. MAT_T_STRUCT = 22, /**< @brief Structure data type */
  162. MAT_T_ARRAY = 23, /**< @brief Array data type */
  163. MAT_T_FUNCTION = 24 /**< @brief Function data type */
  164. };
  165. /** @brief Matlab variable classes
  166. *
  167. * @ingroup MAT
  168. * Matlab variable classes
  169. */
  170. enum matio_classes {
  171. MAT_C_EMPTY = 0, /**< @brief Empty array */
  172. MAT_C_CELL = 1, /**< @brief Matlab cell array class */
  173. MAT_C_STRUCT = 2, /**< @brief Matlab structure class */
  174. MAT_C_OBJECT = 3, /**< @brief Matlab object class */
  175. MAT_C_CHAR = 4, /**< @brief Matlab character array class */
  176. MAT_C_SPARSE = 5, /**< @brief Matlab sparse array class */
  177. MAT_C_DOUBLE = 6, /**< @brief Matlab double-precision class */
  178. MAT_C_SINGLE = 7, /**< @brief Matlab single-precision class */
  179. MAT_C_INT8 = 8, /**< @brief Matlab signed 8-bit integer class */
  180. MAT_C_UINT8 = 9, /**< @brief Matlab unsigned 8-bit integer class */
  181. MAT_C_INT16 = 10, /**< @brief Matlab signed 16-bit integer class */
  182. MAT_C_UINT16 = 11, /**< @brief Matlab unsigned 16-bit integer class */
  183. MAT_C_INT32 = 12, /**< @brief Matlab signed 32-bit integer class */
  184. MAT_C_UINT32 = 13, /**< @brief Matlab unsigned 32-bit integer class */
  185. MAT_C_INT64 = 14, /**< @brief Matlab signed 64-bit integer class */
  186. MAT_C_UINT64 = 15, /**< @brief Matlab unsigned 64-bit integer class */
  187. MAT_C_FUNCTION = 16 /**< @brief Matlab function class */
  188. };
  189. /** @brief Matlab array flags
  190. *
  191. * @ingroup MAT
  192. * Matlab array flags
  193. */
  194. enum matio_flags {
  195. MAT_F_COMPLEX = 0x0800, /**< @brief Complex bit flag */
  196. MAT_F_GLOBAL = 0x0400, /**< @brief Global bit flag */
  197. MAT_F_LOGICAL = 0x0200, /**< @brief Logical bit flag */
  198. MAT_F_DONT_COPY_DATA = 0x0001 /**< Don't copy data, use keep the pointer */
  199. };
  200. /** @brief MAT file compression options
  201. *
  202. * This option is only used on version 5 MAT files
  203. * @ingroup MAT
  204. */
  205. enum matio_compression {
  206. MAT_COMPRESSION_NONE = 0, /**< @brief No compression */
  207. MAT_COMPRESSION_ZLIB = 1 /**< @brief zlib compression */
  208. };
  209. /** @brief matio lookup type
  210. *
  211. * @ingroup MAT
  212. * matio lookup type
  213. */
  214. enum {
  215. MAT_BY_NAME = 1, /**< Lookup by name */
  216. MAT_BY_INDEX = 2 /**< Lookup by index */
  217. };
  218. /** @brief Complex data type using split storage
  219. *
  220. * Complex data type using split real/imaginary pointers
  221. * @ingroup MAT
  222. */
  223. typedef struct mat_complex_split_t {
  224. void *Re; /**< Pointer to the real part */
  225. void *Im; /**< Pointer to the imaginary part */
  226. } mat_complex_split_t;
  227. struct _mat_t;
  228. /** @brief Matlab MAT File information
  229. * Contains information about a Matlab MAT file
  230. * @ingroup MAT
  231. */
  232. typedef struct _mat_t mat_t;
  233. /* Incomplete definition for private library data */
  234. struct matvar_internal;
  235. /** @brief Matlab variable information
  236. *
  237. * Contains information about a Matlab variable
  238. * @ingroup MAT
  239. */
  240. typedef struct matvar_t {
  241. size_t nbytes; /**< Number of bytes for the MAT variable */
  242. int rank; /**< Rank (Number of dimensions) of the data */
  243. enum matio_types data_type; /**< Data type(MAT_T_*) */
  244. int data_size; /**< Bytes / element for the data */
  245. enum matio_classes class_type; /**< Class type in Matlab(MAT_C_DOUBLE, etc) */
  246. int isComplex; /**< non-zero if the data is complex, 0 if real */
  247. int isGlobal; /**< non-zero if the variable is global */
  248. int isLogical; /**< non-zero if the variable is logical */
  249. size_t *dims; /**< Array of lengths for each dimension */
  250. char *name; /**< Name of the variable */
  251. void *data; /**< Pointer to the data */
  252. int mem_conserve; /**< 1 if Memory was conserved with data */
  253. enum matio_compression compression; /**< Variable compression type */
  254. struct matvar_internal *internal; /**< matio internal data */
  255. } matvar_t;
  256. /** @brief sparse data information
  257. *
  258. * Contains information and data for a sparse matrix
  259. * @ingroup MAT
  260. */
  261. typedef struct mat_sparse_t {
  262. int nzmax; /**< Maximum number of non-zero elements */
  263. int *ir; /**< Array of size nzmax where ir[k] is the row of
  264. * data[k]. 0 <= k <= nzmax
  265. */
  266. int nir; /**< number of elements in ir */
  267. int *jc; /**< Array size N+1 (N is number of columns) with
  268. * jc[k] being the index into ir/data of the
  269. * first non-zero element for row k.
  270. */
  271. int njc; /**< Number of elements in jc */
  272. int ndata; /**< Number of complex/real data values */
  273. void *data; /**< Array of data elements */
  274. } mat_sparse_t;
  275. /* Library function */
  276. EXTERN void Mat_GetLibraryVersion(int *major,int *minor,int *release);
  277. /* io.c */
  278. EXTERN char *strdup_vprintf(const char *format, va_list ap);
  279. EXTERN char *strdup_printf(const char *format, ...);
  280. EXTERN void Mat_Critical( const char *format, ... );
  281. EXTERN void Mat_Warning( const char *format, ... );
  282. EXTERN size_t Mat_SizeOf(enum matio_types data_type);
  283. EXTERN size_t Mat_SizeOfClass(int class_type);
  284. /* MAT File functions */
  285. #define Mat_Create(a,b) Mat_CreateVer(a,b,MAT_FT_DEFAULT)
  286. EXTERN mat_t *Mat_CreateVer(const char *matname,const char *hdr_str,
  287. enum mat_ft mat_file_ver);
  288. EXTERN int Mat_Close(mat_t *mat);
  289. EXTERN mat_t *Mat_Open(const char *matname,int mode);
  290. EXTERN const char *Mat_GetFilename(mat_t *matfp);
  291. EXTERN enum mat_ft Mat_GetVersion(mat_t *matfp);
  292. EXTERN int Mat_Rewind(mat_t *mat);
  293. /* MAT variable functions */
  294. EXTERN matvar_t *Mat_VarCalloc(void);
  295. EXTERN matvar_t *Mat_VarCreate(const char *name,enum matio_classes class_type,
  296. enum matio_types data_type,int rank,size_t *dims,
  297. void *data,int opt);
  298. EXTERN matvar_t *Mat_VarCreateStruct(const char *name,int rank,size_t *dims,
  299. const char **fields,unsigned nfields);
  300. EXTERN int Mat_VarDelete(mat_t *mat, const char *name);
  301. EXTERN matvar_t *Mat_VarDuplicate(const matvar_t *in, int opt);
  302. EXTERN void Mat_VarFree(matvar_t *matvar);
  303. EXTERN matvar_t *Mat_VarGetCell(matvar_t *matvar,int index);
  304. EXTERN matvar_t **Mat_VarGetCells(matvar_t *matvar,int *start,int *stride,
  305. int *edge);
  306. EXTERN matvar_t **Mat_VarGetCellsLinear(matvar_t *matvar,int start,int stride,
  307. int edge);
  308. EXTERN size_t Mat_VarGetSize(matvar_t *matvar);
  309. EXTERN unsigned Mat_VarGetNumberOfFields(matvar_t *matvar);
  310. EXTERN int Mat_VarAddStructField(matvar_t *matvar,const char *fieldname);
  311. EXTERN char * const *Mat_VarGetStructFieldnames(const matvar_t *matvar);
  312. EXTERN matvar_t *Mat_VarGetStructFieldByIndex(matvar_t *matvar,
  313. size_t field_index,size_t index);
  314. EXTERN matvar_t *Mat_VarGetStructFieldByName(matvar_t *matvar,
  315. const char *field_name,size_t index);
  316. EXTERN matvar_t *Mat_VarGetStructField(matvar_t *matvar,void *name_or_index,
  317. int opt,int index);
  318. EXTERN matvar_t *Mat_VarGetStructs(matvar_t *matvar,int *start,int *stride,
  319. int *edge,int copy_fields);
  320. EXTERN matvar_t *Mat_VarGetStructsLinear(matvar_t *matvar,int start,int stride,
  321. int edge,int copy_fields);
  322. EXTERN void Mat_VarPrint( matvar_t *matvar, int printdata );
  323. EXTERN matvar_t *Mat_VarRead(mat_t *mat, const char *name );
  324. EXTERN int Mat_VarReadData(mat_t *mat,matvar_t *matvar,void *data,
  325. int *start,int *stride,int *edge);
  326. EXTERN int Mat_VarReadDataAll(mat_t *mat,matvar_t *matvar);
  327. EXTERN int Mat_VarReadDataLinear(mat_t *mat,matvar_t *matvar,void *data,
  328. int start,int stride,int edge);
  329. EXTERN matvar_t *Mat_VarReadInfo( mat_t *mat, const char *name );
  330. EXTERN matvar_t *Mat_VarReadNext( mat_t *mat );
  331. EXTERN matvar_t *Mat_VarReadNextInfo( mat_t *mat );
  332. EXTERN matvar_t *Mat_VarSetCell(matvar_t *matvar,int index,matvar_t *cell);
  333. EXTERN matvar_t *Mat_VarSetStructFieldByIndex(matvar_t *matvar,
  334. size_t field_index,size_t index,matvar_t *field);
  335. EXTERN matvar_t *Mat_VarSetStructFieldByName(matvar_t *matvar,
  336. const char *field_name,size_t index,matvar_t *field);
  337. EXTERN int Mat_VarWrite(mat_t *mat,matvar_t *matvar,
  338. enum matio_compression compress );
  339. EXTERN int Mat_VarWriteInfo(mat_t *mat,matvar_t *matvar);
  340. EXTERN int Mat_VarWriteData(mat_t *mat,matvar_t *matvar,void *data,
  341. int *start,int *stride,int *edge);
  342. /* Other functions */
  343. EXTERN int Mat_CalcSingleSubscript(int rank,int *dims,int *subs);
  344. EXTERN int Mat_CalcSingleSubscript2(int rank,size_t *dims,size_t *subs,size_t *index);
  345. EXTERN int *Mat_CalcSubscripts(int rank,int *dims,int index);
  346. EXTERN size_t *Mat_CalcSubscripts2(int rank,size_t *dims,size_t index);
  347. #endif /* MODELICAMATIO_H */